ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3cx5A1 - ECOD Domain | ECOD

ECOD/Domains/e3cx5A1

e3cx5A1

UID: 000005499

RepresentativePDB

Range: A:27-239
PDB: 3CX5 chain A(all domains)
UniProt: P07256 (all domains)
Gene: COR1

Molecule: Cytochrome b-c1 complex subunit 1, mitochondrial

3D Structure

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Related Domains

Browse other domains in Peptidase_M16,Peptidase_M16_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyPeptidase_M16,Peptidase_M16_C(309.1.1.2)

Ligands

in contact, ≤ 4 Å

Undecyl-Beta-D-MaltopyranosideUMQ
drugDrugBank DB02686within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00675Peptidase_M16

Insulinase (Peptidase family M16)

ClanCL0094Peptidase_ME

PF05193Peptidase_M16_C

Peptidase M16 inactive domain

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 3CX5 RCSB PDB: 3CX5 PDBe: 3CX5 UniProt: P07256

Downloads

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