ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m5xA1 - ECOD Domain | ECOD

ECOD/Domains/e1m5xA1

e1m5xA1

UID: 000005549

RepresentativePDB

Range: A:6-166
PDB: 1M5X chain A(all domains)
UniProt: C0JWR6 (all domains)
Gene: orf170

Molecule: DNA endonuclease I-MsoI

3D Structure

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Related Domains

Browse other domains in LAGLIDADG_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-groupHoming endonucleases(242.1)

TT-groupHoming endonucleases(242.1.1)

FFamilyLAGLIDADG_1(242.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00961LAGLIDADG_1

LAGLIDADG endonuclease

ClanCL0324Homing_endonuc

External Links

ECOD PDB View: 1M5X RCSB PDB: 1M5X PDBe: 1M5X UniProt: C0JWR6

Downloads

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