ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1lbuA2 - ECOD Domain | ECOD

ECOD/Domains/e1lbuA2

e1lbuA2

UID: 000005588

RepresentativePDB

Range: A:84-213
PDB: 1LBU chain A(all domains)
UniProt: P00733 (all domains)

Molecule: MURAMOYL-PENTAPEPTIDE CARBOXYPEPTIDASE

3D Structure

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Related Domains

Browse other domains in Peptidase_M15_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHedgehog/DD-peptidase(307)

HH-groupHedgehog/DD-peptidase(307.1)

TT-groupHedgehog/DD-peptidase(307.1.1)

FFamilyPeptidase_M15_3(307.1.1.5)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08291Peptidase_M15_3

Peptidase M15

ClanCL0170Peptidase_MD

External Links

ECOD PDB View: 1LBU RCSB PDB: 1LBU PDBe: 1LBU UniProt: P00733

Downloads

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