ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2ccqA1 - ECOD Domain | ECOD

ECOD/Domains/e2ccqA1

e2ccqA1

UID: 000005621

RepresentativePDB

Range: A:11-109
PDB: 2CCQ chain A(all domains)
UniProt: Q96IV0 (all domains)
Gene: NGLY1

Molecule: PEPTIDE N-GLYCANASE HOMOLOG

3D Structure

Loading viewer...

Related Domains

Browse other domains in PUB →

Classification

AArchitecturea+b two layers(a.11)

XX-groupR3H domain-like(320)

HH-groupPUB domain(320.4)

TT-groupPUB domain(320.4.1)

FFamilyPUB(320.4.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PUB domain

External Links

ECOD PDB View: 2CCQ RCSB PDB: 2CCQ PDBe: 2CCQ UniProt: Q96IV0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure