ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jkvF1 - ECOD Domain | ECOD

ECOD/Domains/e1jkvF1

e1jkvF1

UID: 000056253

PDB

Range: F:1-266
PDB: 1JKV chain F(all domains)
UniProt: P60355 (all domains)

Molecule: pseudocatalase

3D Structure

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Related Domains

Browse other domains in Mn_catalase →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupFerritin/Heme oxygenase(150.1)

TT-groupFerritin(150.1.1)

FFamilyMn_catalase(150.1.1.6)

Ligands

in contact, ≤ 4 Å

Hydroxide ionOH
drugDrugBank DB14522
Azide ionAZI
Calcium ionCA

Pfam Families

PF05067Mn_catalase

Manganese containing catalase

ClanCL0044Ferritin

External Links

ECOD PDB View: 1JKV RCSB PDB: 1JKV PDBe: 1JKV UniProt: P60355

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

MANGANESE (III) IONMN3

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.