ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2gyqB1 - ECOD Domain | ECOD

ECOD/Domains/e2gyqB1

e2gyqB1

UID: 000056266

PDB

Range: B:3-159
PDB: 2GYQ chain B(all domains)
UniProt: Q6N4M9 (all domains)
Gene: RPA3308

Molecule: ycfI, putative structural protein

3D Structure

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Related Domains

Browse other domains in DUF892 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupFerritin/Heme oxygenase(150.1)

TT-groupFerritin(150.1.1)

FFamilyDUF892(150.1.1.7)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
Zinc ionZN
metal

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

Acetate

Pfam Families

Domain of unknown function (DUF892)

ClanCL0044Ferritin

External Links

ECOD PDB View: 2GYQ RCSB PDB: 2GYQ PDBe: 2GYQ UniProt: Q6N4M9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.