ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2itbB1 - ECOD Domain | ECOD

ECOD/Domains/e2itbB1

e2itbB1

UID: 000056411

PDB

Range: B:4-201
PDB: 2ITB chain B(all domains)
UniProt: Q88KV1 (all domains)
Gene: miaE

Molecule: TRNA-(Ms(2)io(6)a)-hydroxylase, putative

3D Structure

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Related Domains

Browse other domains in MiaE →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupFerritin/Heme oxygenase(150.1)

TT-groupHeme oxygenase/Ribonucleotide reductase(150.1.2)

FFamilyMiaE(150.1.2.8)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
Unknown ligandUNL

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)

ClanCL0044Ferritin

External Links

ECOD PDB View: 2ITB RCSB PDB: 2ITB PDBe: 2ITB UniProt: Q88KV1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.