ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rxqD1 - ECOD Domain | ECOD

ECOD/Domains/e1rxqD1

e1rxqD1

UID: 000056807

PDB

Range: D:10-178
PDB: 1RXQ chain D(all domains)
UniProt: O31562 (all domains)
Gene: yfiT

Molecule: yfiT

3D Structure

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Related Domains

Browse other domains in DinB_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupYfiT-like putative metal-dependent hydrolases(620)

HH-groupYfiT-like putative metal-dependent hydrolases(620.1)

TT-groupYfiT-like putative metal-dependent hydrolases(620.1.1)

FFamilyDinB_2(620.1.1.6)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142
AlanineALA
drugDrugBank DB00160within 5 Å only

Pfam Families

DinB superfamily

ClanCL0310DinB

External Links

ECOD PDB View: 1RXQ RCSB PDB: 1RXQ PDBe: 1RXQ UniProt: O31562

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Serine

drugDrugBank DB00133within 5 Å only

ThreonineTHR

drugDrugBank DB00156within 5 Å only

NICKEL (II) IONNI

metal

Shown in the structure viewer. Drug annotations from DrugDomain.