ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m9dD1 - ECOD Domain | ECOD

ECOD/Domains/e1m9dD1

e1m9dD1

UID: 000056886

PDB

Range: D:1-145
PDB: 1M9D chain D(all domains)
UniProt: P12497 (all domains)
Gene: gag-pol

Molecule: HIV-1 Capsid

3D Structure

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Related Domains

Browse other domains in Gag_p24 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyGag_p24(170.2.1.1)

Pfam Families

PF00607Gag_p24

gag protein p24 N-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 1M9D RCSB PDB: 1M9D PDBe: 1M9D UniProt: P12497

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