ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rqiA1 - ECOD Domain | ECOD

ECOD/Domains/e1rqiA1

e1rqiA1

UID: 000057144

PDB

Range: A:22-320
PDB: 1RQI chain A(all domains)
UniProt: P22939 (all domains)
Gene: ispA

Molecule: Geranyltranstransferase

3D Structure

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Related Domains

Browse other domains in polyprenyl_synt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilypolyprenyl_synt(141.1.1.1)

Ligands

in contact, ≤ 4 Å

Dimethylallyl S-ThiolodiphosphateDST
drugDrugBank DB02270
Isopentyl PyrophosphateIPR
drugDrugBank DB02508

Pfam Families

PF00348polyprenyl_synt

Polyprenyl synthetase

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 1RQI RCSB PDB: 1RQI PDBe: 1RQI UniProt: P22939

Downloads

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DiphosphateDPO

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.