ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vlrB1 - ECOD Domain | ECOD

ECOD/Domains/e1vlrB1

e1vlrB1

UID: 000005799

RepresentativePDB

Range: B:39-145
PDB: 1VLR chain B(all domains)
UniProt: Q9DAR7 (all domains)
Gene: Dcps

Molecule: mRNA decapping enzyme

3D Structure

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Related Domains

Browse other domains in DcpS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupmRNA decapping enzyme DcpS N-terminal domain(519)

HH-groupmRNA decapping enzyme DcpS N-terminal domain(519.1)

TT-groupmRNA decapping enzyme DcpS N-terminal domain(519.1.1)

FFamilyDcpS(519.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Scavenger mRNA decapping enzyme (DcpS) N-terminal

External Links

ECOD PDB View: 1VLR RCSB PDB: 1VLR PDBe: 1VLR UniProt: Q9DAR7

Downloads

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