ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1kyoC2 - ECOD Domain | ECOD

ECOD/Domains/e1kyoC2

e1kyoC2

UID: 000058173

PDB

Range: C:14-261
PDB: 1KYO chain C(all domains)
UniProt: P00163 (all domains)
Gene: COB

Molecule: CYTOCHROME B

3D Structure

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Related Domains

Browse other domains in Cytochrome_B, Cytochrom_B_N_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupTransmembrane di-heme cytochromes(5069.1.1)

FFamilyCytochrome_B, Cytochrom_B_N_2(5069.1.1.54)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317within 5 Å only
Stigmatellin aSMA

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00033Cytochrome_B

Cytochrome b/b6/petB

ClanCL03282heme_cytochrom

PF13631Cytochrom_B_N_2

Cytochrome b(N-terminal)/b6/petB

ClanCL03282heme_cytochrom

External Links

ECOD PDB View: 1KYO RCSB PDB: 1KYO PDBe: 1KYO UniProt: P00163

Downloads

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