ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nenC1 - ECOD Domain | ECOD

ECOD/Domains/e1nenC1

e1nenC1

UID: 000058226

PDB

Range: C:1-129
PDB: 1NEN chain C(all domains)
UniProt: P69054 (all domains)
Gene: sdhC

Molecule: Succinate dehydrogenase cytochrome b-556 subunit

3D Structure

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Related Domains

Browse other domains in Sdh_cyt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupFumarate reductase respiratory complex transmembrane subunits(5069.1.3)

FFamilySdh_cyt(5069.1.3.1)

Ligands

in contact, ≤ 4 Å

2-[1-METHYLHEXYL]-4,6-DINITROPHENOLDNT
drugDrugBank DB07671
L-Alpha-Phosphatidyl-Beta-Oleoyl-Gamma-Palmitoyl-PhosphatidylethanolamineEPH
drugDrugBank DB03047

Pfam Families

PF01127Sdh_cyt

Succinate dehydrogenase/Fumarate reductase transmembrane subunit

ClanCL0335FumRed-TM

External Links

ECOD PDB View: 1NEN RCSB PDB: 1NEN PDBe: 1NEN UniProt: P69054

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

FerrohemeHEM

drugDrugBank DB18267

CardiolipinCDN

Shown in the structure viewer. Drug annotations from DrugDomain.