ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vqoR1 - ECOD Domain | ECOD

ECOD/Domains/e1vqoR1

e1vqoR1

UID: 000005852

RepresentativePDB

Range: R:1-150
PDB: 1VQO chain R(all domains)
UniProt: P10970 (all domains)
Gene: rpl22

Molecule: 50S ribosomal protein L22P

3D Structure

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Related Domains

Browse other domains in Ribosomal_L22 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupEnolase-N/ribosomal protein(218)

HH-groupRibosomal protein L22(218.2)

TT-groupRibosomal protein L22(218.2.1)

FFamilyRibosomal_L22(218.2.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal
Sodium ionNA
metal
Strontium ionSR

Pfam Families

PF00237Ribosomal_L22

Ribosomal protein L22p/L17e

External Links

ECOD PDB View: 1VQO RCSB PDB: 1VQO PDBe: 1VQO UniProt: P10970

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.