ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1w3yA3 - ECOD Domain | ECOD

ECOD/Domains/e1w3yA3

e1w3yA3

UID: 000059270

PDB

Range: A:170-540
PDB: 1W3Y chain A(all domains)
UniProt: Q54873 (all domains)
Gene: SP_0314

Molecule: HYALURONATE LYASE

3D Structure

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Related Domains

Browse other domains in Lyase_8_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyLyase_8_N(109.2.1.27)

Ligands

in contact, ≤ 4 Å

(2E,4R,5S)-2,3,4,5-TETRAHYDROXY-6-(PALMITOYLOXY)HEX-2-ENOIC ACIDPVC
drugDrugBank DB08438

+ 2 additives (Sulfate ion, Xylitol)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF08124Lyase_8_N

Polysaccharide lyase family 8, N terminal alpha-helical domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 1W3Y RCSB PDB: 1W3Y PDBe: 1W3Y UniProt: Q54873

Downloads

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XylitolXYL

DrugBank DB11195

Shown in the structure viewer. Drug annotations from DrugDomain.