ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1o79B2 - ECOD Domain | ECOD

ECOD/Domains/e1o79B2

e1o79B2

UID: 000059381

PDB

Range: B:37-307
PDB: 1O79 chain B(all domains)
UniProt: P33247 (all domains)
Gene: shc

Molecule: SQUALENE--HOPENE CYCLASE

3D Structure

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Related Domains

Browse other domains in SQHop_cyclase_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilySQHop_cyclase_N(109.2.1.33)

Ligands

in contact, ≤ 4 Å

Methyl-[4-(4-Piperidine-1-Ylmethyl-Phenyl)-Cyclohexyl]-Carbaminic Acid-(4-Chlorophenyl)-EsterR23
drugDrugBank DB03748

+ 1 additive ((Hydroxyethyloxy)Tri(Ethyloxy)Octane)

(Hydroxyethyloxy)Tri(Ethyloxy)OctaneC8E

Pfam Families

PF13249SQHop_cyclase_N

Squalene-hopene cyclase N-terminal domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 1O79 RCSB PDB: 1O79 PDBe: 1O79 UniProt: P33247

Downloads

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DrugBank DB04233

Shown in the structure viewer. Drug annotations from DrugDomain.