ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vqoA2 - ECOD Domain | ECOD

ECOD/Domains/e1vqoA2

e1vqoA2

UID: 000000595

RepresentativePDB

Range: A:91-237
PDB: 1VQO chain A(all domains)
UniProt: P20276 (all domains)
Gene: rpl2

Molecule: 50S ribosomal protein L2P

3D Structure

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Related Domains

Browse other domains in Ribosomal_L2_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyRibosomal_L2_C(4.1.1.38)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal
Strontium ionSR

Pfam Families

PF03947Ribosomal_L2_C

Ribosomal Proteins L2, C-terminal domain

ClanCL0010SH3

External Links

ECOD PDB View: 1VQO RCSB PDB: 1VQO PDBe: 1VQO UniProt: P20276

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.