ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1gxmB1 - ECOD Domain | ECOD

ECOD/Domains/e1gxmB1

e1gxmB1

UID: 000059588

PDB

Range: B:326-649
PDB: 1GXM chain B(all domains)
UniProt: Q9F7L3 (all domains)
Gene: Pel10A

Molecule: PECTATE LYASE

3D Structure

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Related Domains

Browse other domains in Pec_lyase →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyPec_lyase(109.2.1.29)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09492Pec_lyase

Pectic acid lyase

ClanCL00596_Hairpin

External Links

ECOD PDB View: 1GXM RCSB PDB: 1GXM PDBe: 1GXM UniProt: Q9F7L3

Downloads

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