ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1kreA1 - ECOD Domain | ECOD

ECOD/Domains/e1kreA1

e1kreA1

UID: 000059602

PDB

Range: A:36-510
PDB: 1KRE chain A(all domains)
UniProt: P31723 (all domains)
Gene: MSDC

Molecule: Mannosyl-oligosaccharide alpha-1,2-mannosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_47 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_47(109.2.1.8)

Ligands

in contact, ≤ 4 Å

1-deoxymannojirimycinDMJ
drugDrugBank DB03955
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01532Glyco_hydro_47

Glycosyl hydrolase family 47

ClanCL00596_Hairpin

External Links

ECOD PDB View: 1KRE RCSB PDB: 1KRE PDBe: 1KRE UniProt: P31723

Downloads

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