ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1tnbE1 - ECOD Domain | ECOD

ECOD/Domains/e1tnbE1

e1tnbE1

UID: 000059734

PDB

Range: E:55-368
PDB: 1TNB chain E(all domains)
UniProt: Q04631 (all domains)
Gene: Fnta

Molecule: geranylgeranyltransferase type I alpha subunit

3D Structure

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Related Domains

Browse other domains in PPTA →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

2-[METHYL-(5-GERANYL-4-METHYL-PENT-3-ENYL)-AMINO]-ETHYL-DIPHOSPHATEMGM
drugDrugBank DB08180

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 1TNB RCSB PDB: 1TNB PDBe: 1TNB UniProt: Q04631

Downloads

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