ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qbqA1 - ECOD Domain | ECOD

ECOD/Domains/e1qbqA1

e1qbqA1

UID: 000059737

PDB

Range: A:55-366
PDB: 1QBQ chain A(all domains)
UniProt: Q04631 (all domains)
Gene: Fnta

Molecule: FPT ALPHA-SUBUNIT

3D Structure

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Related Domains

Browse other domains in PPTA →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

ALPHA-HYDROXYFARNESYLPHOSPHONIC ACIDHFP
drugDrugBank DB07895

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 1QBQ RCSB PDB: 1QBQ PDBe: 1QBQ UniProt: Q04631

Downloads

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Drug annotations from DrugDomain.