ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dceC2 - ECOD Domain | ECOD

ECOD/Domains/e1dceC2

e1dceC2

UID: 000059742

PDB

Range: C:1-241,C:351-443
PDB: 1DCE chain C(all domains)
UniProt: Q08602 (all domains)
Gene: Rabggta

Molecule: PROTEIN (RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT)

3D Structure

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Related Domains

Browse other domains in PPTA →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 1DCE RCSB PDB: 1DCE PDBe: 1DCE UniProt: Q08602

Downloads

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