ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ocrA1 - ECOD Domain | ECOD

ECOD/Domains/e1ocrA1

e1ocrA1

UID: 000060193

PDB

Range: A:1-514
PDB: 1OCR chain A(all domains)
UniProt: P00396 (all domains)
Gene: MT-CO1

Molecule: CYTOCHROME C OXIDASE

3D Structure

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Related Domains

Browse other domains in COX1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupCytochrome c oxidase subunit I-like(5038)

HH-groupCytochrome c oxidase subunit I-like(5038.1)

TT-groupCytochrome c oxidase subunit I-like(5038.1.1)

FFamilyCOX1(5038.1.1.1)

Ligands

in contact, ≤ 4 Å

COPPER (II) IONCU
metal
Heme-aHEA
Magnesium ionMG

Pfam Families

Cytochrome C and Quinol oxidase polypeptide I

ClanCL0714COX1-like

External Links

ECOD PDB View: 1OCR RCSB PDB: 1OCR PDBe: 1OCR UniProt: P00396

Downloads

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metal

Sodium ionNA

metal

Shown in the structure viewer. Drug annotations from DrugDomain.