ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ca5B1 - ECOD Domain | ECOD

ECOD/Domains/e2ca5B1

e2ca5B1

UID: 000060673

PDB

Range: B:20-75
PDB: 2CA5 chain B(all domains)
UniProt: P0A223 (all domains)
Gene: sctF

Molecule: MXIH

3D Structure

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Related Domains

Browse other domains in T3SS_needle_F →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLong alpha-hairpin(192)

HH-groupMxiH-like(192.18)

TT-groupMxiH-like(192.18.1)

FFamilyT3SS_needle_F(192.18.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Glycerin, Isopropyl alcohol)

GlycerinGOL
DrugBank DB09462
Isopropyl alcoholIPA

Pfam Families

PF09392T3SS_needle_F

Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF

External Links

ECOD PDB View: 2CA5 RCSB PDB: 2CA5 PDBe: 2CA5 UniProt: P0A223

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.