ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nkzF1 - ECOD Domain | ECOD

ECOD/Domains/e1nkzF1

e1nkzF1

UID: 000061301

PDB

Range: F:1-41
PDB: 1NKZ chain F(all domains)
UniProt: P26790 (all domains)

Molecule: Light-harvesting protein B-800/850, beta chain

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupBacterial light-harvesting complex subunits(5074)

HH-groupBacterial light-harvesting complex subunits(5074.1)

TT-groupBacterial light-harvesting complex subunits(5074.1.1)

FFamilyLHC(5074.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll ABCL
drugDrugBank DB01853
Rhodopin b-D-glucosideRG1

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Antenna complex alpha/beta subunit

External Links

ECOD PDB View: 1NKZ RCSB PDB: 1NKZ PDBe: 1NKZ UniProt: P26790

Downloads

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