ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1lghK1 - ECOD Domain | ECOD

ECOD/Domains/e1lghK1

e1lghK1

UID: 000061306

PDB

Range: K:3-45
PDB: 1LGH chain K(all domains)
UniProt: P95673 (all domains)
Gene: B1

Molecule: LIGHT HARVESTING COMPLEX II

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupBacterial light-harvesting complex subunits(5074)

HH-groupBacterial light-harvesting complex subunits(5074.1)

TT-groupBacterial light-harvesting complex subunits(5074.1.1)

FFamilyLHC(5074.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll ABCL
drugDrugBank DB01853
UNDECYLAMINE-N,N-DIMETHYL-N-OXIDEDET
drugDrugBank DB07646

Pfam Families

Antenna complex alpha/beta subunit

External Links

ECOD PDB View: 1LGH RCSB PDB: 1LGH PDBe: 1LGH UniProt: P95673

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Heptane-1,2,3-TriolHTO

drugDrugBank DB04079

LycopeneLYC

drugDrugBank DB11231

Shown in the structure viewer. Drug annotations from DrugDomain.