ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ddxB1 - ECOD Domain | ECOD

ECOD/Domains/e1ddxB1

e1ddxB1

UID: 000061865

PDB

Range: B:1074-1583
PDB: 1DDX chain B(all domains)
UniProt: Q05769 (all domains)
Gene: Ptgs2

Molecule: PROTEIN (PROSTAGLANDIN H2 SYNTHASE-2)

3D Structure

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Related Domains

Browse other domains in An_peroxidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyAn_peroxidase(136.1.1.3)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Prostaglandin G2PGX
drugDrugBank DB03866

Pfam Families

PF03098An_peroxidase

Animal haem peroxidase

ClanCL0617Peroxidase

External Links

ECOD PDB View: 1DDX RCSB PDB: 1DDX PDBe: 1DDX UniProt: Q05769

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (octyl beta-D-glucopyranoside)

octyl beta-D-glucopyranosideBOG

Shown in the structure viewer. Drug annotations from DrugDomain.