ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ikiA1 - ECOD Domain | ECOD

ECOD/Domains/e1ikiA1

e1ikiA1

UID: 000062320

PDB

Range: A:58-240
PDB: 1IKI chain A(all domains)
UniProt: P15555 (all domains)

Molecule: D-ALANYL-D-ALANINE CARBOXYPEPTIDASE

3D Structure

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Related Domains

Browse other domains in Beta-lactamase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyBeta-lactamase(4019.1.1.1)

Ligands

in contact, ≤ 4 Å

D-AlanineDAL
drugDrugBank DB01786
Glycyl-L-alpha-amino-epsilon-pimelyl-D-alanineREY
drugDrugBank DB03927

Shown in the structure viewer.

Pfam Families

PF00144Beta-lactamase

Beta-lactamase

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 1IKI RCSB PDB: 1IKI PDBe: 1IKI UniProt: P15555

Downloads

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Drug annotations from DrugDomain.