ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nymA1 - ECOD Domain | ECOD

ECOD/Domains/e1nymA1

e1nymA1

UID: 000062345

PDB

Range: A:66-179
PDB: 1NYM chain A(all domains)
UniProt: P62593 (all domains)
Gene: bla;

Molecule: Beta-lactamase TEM

3D Structure

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Related Domains

Browse other domains in Beta-lactamase2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyBeta-lactamase2(4019.1.1.6)

Ligands

in contact, ≤ 4 Å

[(2-AMINO-ALPHA-METHOXYIMINO-4-THIAZOLYLACETYL)AMINO]METHYLBORONIC ACIDCXB
drugDrugBank DB07599
Potassium ionK
metal

+ 1 additive (Phosphate ion)

Pfam Families

PF13354Beta-lactamase2

Beta-lactamase enzyme family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 1NYM RCSB PDB: 1NYM PDBe: 1NYM UniProt: P62593

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.