ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vk6A2 - ECOD Domain | ECOD

ECOD/Domains/e1vk6A2

e1vk6A2

UID: 000006251

RepresentativePDB

Range: A:126-256
PDB: 1VK6 chain A(all domains)
UniProt: P32664 (all domains)
Gene: nudC

Molecule: NADH pyrophosphatase

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 1VK6 RCSB PDB: 1VK6 PDBe: 1VK6 UniProt: P32664

Downloads

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