ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rtuA1 - ECOD Domain | ECOD

ECOD/Domains/e1rtuA1

e1rtuA1

UID: 000006276

RepresentativePDB

Range: A:1-114
PDB: 1RTU chain A(all domains)
UniProt: P00654 (all domains)
Gene: RNU2

Molecule: RIBONUCLEASE U2

3D Structure

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Related Domains

Browse other domains in Ribonuclease →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMicrobial ribonucleases-like(234)

HH-groupMicrobial ribonucleases(234.1)

TT-groupMicrobial ribonucleases(234.1.1)

FFamilyRibonuclease(234.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00545Ribonuclease

ribonuclease

External Links

ECOD PDB View: 1RTU RCSB PDB: 1RTU PDBe: 1RTU UniProt: P00654

Downloads

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