ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1p7lD1 - ECOD Domain | ECOD

ECOD/Domains/e1p7lD1

e1p7lD1

UID: 000063197

PDB

Range: D:1-102
PDB: 1P7L chain D(all domains)
UniProt: P0A817 (all domains)
Gene: metK

Molecule: S-adenosylmethionine synthetase

3D Structure

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Related Domains

Browse other domains in S-AdoMet_synt_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupS-adenosylmethionine synthetase(327.17)

TT-groupS-adenosylmethionine synthetase(327.17.1)

FFamilyS-AdoMet_synt_N(327.17.1.1)

Ligands

in contact, ≤ 4 Å

(Diphosphono)Aminophosphonic AcidPPK
drugDrugBank DB03075
AdemetionineSAM
drugDrugBank DB00118

Pfam Families

PF00438S-AdoMet_synt_N

S-adenosylmethionine synthetase, N-terminal domain

External Links

ECOD PDB View: 1P7L RCSB PDB: 1P7L PDBe: 1P7L UniProt: P0A817

Downloads

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Potassium ion

K

metal

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.