ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2hvfA1 - ECOD Domain | ECOD

ECOD/Domains/e2hvfA1

e2hvfA1

UID: 000063785

PDB

Range: A:1-52
PDB: 2HVF chain A(all domains)
UniProt: P02417 (all domains)
Gene: rplI

Molecule: 50S ribosomal protein L9

3D Structure

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Related Domains

Browse other domains in Ribosomal_L9_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupL9 N-domain-like(4076)

HH-groupL9 N-domain-like(4076.1)

TT-groupL9 N-domain-like(4076.1.1)

FFamilyRibosomal_L9_N(4076.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

+ 2 additives (Acetic acid, Imidazole)

Acetic acidACY

Pfam Families

PF01281Ribosomal_L9_N

Ribosomal protein L9, N-terminal domain

ClanCL0885L9_N_sp

External Links

ECOD PDB View: 2HVF RCSB PDB: 2HVF PDBe: 2HVF UniProt: P02417

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03166

ImidazoleIMD

DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.