ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1s72M1 - ECOD Domain | ECOD

ECOD/Domains/e1s72M1

e1s72M1

UID: 000064128

PDB

Range: M:1-194
PDB: 1S72 chain M(all domains)
UniProt: P60618 (all domains)
Gene: rpl15e

Molecule: 50S ribosomal protein L15e

3D Structure

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Related Domains

Browse other domains in Ribosomal_L15e →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRibosomal proteins S24e, L23 and L15e(304.109)

TT-groupRibosomal proteins S24e, L23 and L15e(304.109.1)

FFamilyRibosomal_L15e(304.109.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Potassium ionK
metal
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

PF00827Ribosomal_L15e

Ribosomal L15

ClanCL0652S24e_L23_L15e

External Links

ECOD PDB View: 1S72 RCSB PDB: 1S72 PDBe: 1S72 UniProt: P60618

Downloads

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Drug annotations from DrugDomain.