ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yitM1 - ECOD Domain | ECOD

ECOD/Domains/e1yitM1

e1yitM1

UID: 000064158

PDB

Range: M:1-193
PDB: 1YIT chain M(all domains)
UniProt: P60618 (all domains)
Gene: rpl15e

Molecule: 50S RIBOSOMAL PROTEIN L15E

3D Structure

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Related Domains

Browse other domains in Ribosomal_L15e →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRibosomal proteins S24e, L23 and L15e(304.109)

TT-groupRibosomal proteins S24e, L23 and L15e(304.109.1)

FFamilyRibosomal_L15e(304.109.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Potassium ionK
metal
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

PF00827Ribosomal_L15e

Ribosomal L15

ClanCL0652S24e_L23_L15e

External Links

ECOD PDB View: 1YIT RCSB PDB: 1YIT PDBe: 1YIT UniProt: P60618

Downloads

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Drug annotations from DrugDomain.