ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2bo9B2 - ECOD Domain | ECOD

ECOD/Domains/e2bo9B2

e2bo9B2

UID: 000006421

RepresentativePDB

Range: B:99-217
PDB: 2BO9 chain B(all domains)
UniProt: Q9BS40 (all domains)
Gene: LXN

Molecule: HUMAN LATEXIN

3D Structure

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Related Domains

Browse other domains in Latexin_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupCystatin/monellin(243.3)

TT-groupCystatin/monellin(243.3.1)

FFamilyLatexin_N(243.3.1.4)

Ligands

in contact, ≤ 4 Å

ValineVAL
drugDrugBank DB00161within 5 Å only

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Pfam Families

Latexin

ClanCL0320PepSY

External Links

ECOD PDB View: 2BO9 RCSB PDB: 2BO9 PDBe: 2BO9 UniProt: Q9BS40

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.