ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vjvB1 - ECOD Domain | ECOD

ECOD/Domains/e2vjvB1

e2vjvB1

UID: 000064213

PDB

Range: B:6-130
PDB: 2VJV chain B(all domains)
UniProt: Q933Z0 (all domains)
Gene: tnpA

Molecule: TRANSPOSASE ORFA

3D Structure

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Related Domains

Browse other domains in Y1_Tnp →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOrigin of replication-binding domains(304.55)

TT-groupTransposase IS200-like(304.55.2)

FFamilyY1_Tnp(304.55.2.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Transposase IS200 like

ClanCL0481HUH

External Links

ECOD PDB View: 2VJV RCSB PDB: 2VJV PDBe: 2VJV UniProt: Q933Z0

Downloads

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