ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1tr0V1 - ECOD Domain | ECOD

ECOD/Domains/e1tr0V1

e1tr0V1

UID: 000064494

PDB

Range: V:3-108
PDB: 1TR0 chain V(all domains)
UniProt: Q9AR79 (all domains)
Gene: sp1

Molecule: stable protein 1

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyDabb(304.4.1.14)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Stress responsive A/B Barrel Domain

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 1TR0 RCSB PDB: 1TR0 PDBe: 1TR0 UniProt: Q9AR79

Downloads

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