ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1vqyH1 - ECOD Domain | ECOD

ECOD/Domains/e1vqyH1

e1vqyH1

UID: 000064568

PDB

Range: H:1-104
PDB: 1VQY chain H(all domains)
UniProt: A9CLJ4 (all domains)
Gene: Atu5224

Molecule: hypothetical protein AGR_pAT_315

3D Structure

Loading viewer...

Related Domains

Browse other domains in NIPSNAP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyNIPSNAP(304.4.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07978NIPSNAP

NIPSNAP

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 1VQY RCSB PDB: 1VQY PDBe: 1VQY UniProt: A9CLJ4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure