ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1oj4B1 - ECOD Domain | ECOD

ECOD/Domains/e1oj4B1

e1oj4B1

UID: 000064766

PDB

Range: B:164-283
PDB: 1OJ4 chain B(all domains)
UniProt: Q8FI04 (all domains)
Gene: ispE

Molecule: 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE

3D Structure

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Related Domains

Browse other domains in GHMP_kinases_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupGHMP Kinase, C-terminal domain(304.1)

TT-groupGHMP Kinase, C-terminal domain(304.1.1)

FFamilyGHMP_kinases_C(304.1.1.1)

Ligands

in contact, ≤ 4 Å

4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritolCDM
drugDrugBank DB03687
Phosphoaminophosphonic acid-adenylate esterANP
within 5 Å only

Shown in the structure viewer.

Pfam Families

PF08544GHMP_kinases_C

GHMP kinases C terminal

ClanCL0677GHMP_C

External Links

ECOD PDB View: 1OJ4 RCSB PDB: 1OJ4 PDBe: 1OJ4 UniProt: Q8FI04

Downloads

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Drug annotations from DrugDomain.