ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rusA1 - ECOD Domain | ECOD

ECOD/Domains/e1rusA1

e1rusA1

UID: 000064925

PDB

Range: A:3-137
PDB: 1RUS chain A(all domains)
UniProt: P04718 (all domains)
Gene: cbbM

Molecule: RUBISCO (RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE)

3D Structure

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Related Domains

Browse other domains in RuBisCO_large_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRuBisCO, large subunit, small (N-terminal) domain(304.10)

TT-groupRuBisCO, large subunit, small (N-terminal) domain(304.10.1)

FFamilyRuBisCO_large_N(304.10.1.1)

Ligands

in contact, ≤ 4 Å

3-phospho-D-glyceric acid3PG
drugDrugBank DB04510

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02788RuBisCO_large_N

Ribulose bisphosphate carboxylase large chain, N-terminal domain

External Links

ECOD PDB View: 1RUS RCSB PDB: 1RUS PDBe: 1RUS UniProt: P04718

Downloads

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