ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r8cA2 - ECOD Domain | ECOD

ECOD/Domains/e1r8cA2

e1r8cA2

UID: 000065186

PDB

Range: A:258-437
PDB: 1R8C chain A(all domains)
UniProt: O28126 (all domains)
Gene: cca

Molecule: tRNA nucleotidyltransferase

3D Structure

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Related Domains

Browse other domains in CAA_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20)

TT-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20.1)

FFamilyCAA_C(304.20.1.4)

Ligands

in contact, ≤ 4 Å

Uridine 5'-triphosphateUTP
drugDrugBank DB04005
MANGANESE (II) IONMN
metal
Sodium ionNA
metal

Pfam Families

CCA-adding enzyme, C-terminal domain

External Links

ECOD PDB View: 1R8C RCSB PDB: 1R8C PDBe: 1R8C UniProt: O28126

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.