ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1b3aA1 - ECOD Domain | ECOD

ECOD/Domains/e1b3aA1

e1b3aA1

UID: 000000656

RepresentativePDB

Range: A:2-68
PDB: 1B3A chain A(all domains)
UniProt: P13501 (all domains)
Gene: CCL5

Molecule: PROTEIN (RANTES)

3D Structure

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Related Domains

Browse other domains in IL8 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupIL8-related(1170)

HH-groupIL8-related(1170.1)

TT-groupIL8(1170.1.1)

FFamilyIL8(1170.1.1.1)

Ligands

in contact, ≤ 4 Å

Pentyloxyamino-acetaldehydeAOP

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Small cytokines (intecrine/chemokine), interleukin-8 like

ClanCL0730IL8

External Links

ECOD PDB View: 1B3A RCSB PDB: 1B3A PDBe: 1B3A UniProt: P13501

Downloads

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