ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1nlkR1 - ECOD Domain | ECOD

ECOD/Domains/e1nlkR1

e1nlkR1

UID: 000065632

PDB

Range: R:2-143
PDB: 1NLK chain R(all domains)
UniProt: P15266 (all domains)
Gene: ndk

Molecule: NUCLEOSIDE DIPHOSPHATE KINASE

3D Structure

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Related Domains

Browse other domains in NDK →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNucleoside diphosphate kinases(304.34)

TT-groupNucleoside diphosphate kinases(304.34.1)

FFamilyNDK(304.34.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Nucleoside diphosphate kinase

External Links

ECOD PDB View: 1NLK RCSB PDB: 1NLK PDBe: 1NLK UniProt: P15266

Downloads

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