ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1k5nA2 - ECOD Domain | ECOD

ECOD/Domains/e1k5nA2

e1k5nA2

UID: 000006589

RepresentativePDB

Range: A:1-181
PDB: 1K5N chain A(all domains)
UniProt: P01889 (all domains)
Gene: HLA-B

Molecule: major histocompatibility complex molecule HLA-B*2709

3D Structure

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Related Domains

Browse other domains in MHC_I →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_I(233.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Class I Histocompatibility antigen, domains alpha 1 and 2

ClanCL0343MHC

External Links

ECOD PDB View: 1K5N RCSB PDB: 1K5N PDBe: 1K5N UniProt: P01889

Downloads

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