ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ibkA3 - ECOD Domain | ECOD

ECOD/Domains/e2ibkA3

e2ibkA3

UID: 000065951

PDB

Range: A:1-20,A:76-176
PDB: 2IBK chain A(all domains)
UniProt: Q97W02 (all domains)
Gene: dbh

Molecule: DNA polymerase IV

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyIMS(304.48.1.10)

Ligands

in contact, ≤ 4 Å

1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENEBAP
drugDrugBank DB07435
Calcium ionCA
metal
PYROPHOSPHATE 2-

Pfam Families

impB/mucB/samB family

External Links

ECOD PDB View: 2IBK RCSB PDB: 2IBK PDBe: 2IBK UniProt: Q97W02

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
1,2-ETHANEDIOLEDO
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.