ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1n1hA4 - ECOD Domain | ECOD

ECOD/Domains/e1n1hA4

e1n1hA4

UID: 000066462

PDB

Range: A:380-775
PDB: 1N1H chain A(all domains)
UniProt: P0CK31 (all domains)
Gene: L1

Molecule: Minor core protein lambda 3

3D Structure

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Related Domains

Browse other domains in RdRP_5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_5(304.48.1.23)

Ligands

in contact, ≤ 4 Å

3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATECH1
3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATEGH3
MANGANESE (II) IONMN

Pfam Families

Reovirus RNA-dependent RNA polymerase lambda 3

ClanCL0027RdRP

External Links

ECOD PDB View: 1N1H RCSB PDB: 1N1H PDBe: 1N1H UniProt: P0CK31

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.