ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rkiB1 - ECOD Domain | ECOD

ECOD/Domains/e1rkiB1

e1rkiB1

UID: 000066784

PDB

Range: B:1-68
PDB: 1RKI chain B(all domains)
UniProt: Q8ZYK2 (all domains)
Gene: PAE0736

Molecule: hypothetical protein

3D Structure

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Related Domains

Browse other domains in DUF3195 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin-like domain in ThiI(304.120)

TT-groupFerredoxin-like domain in ThiI(304.120.1)

FFamilyDUF3195(304.120.1.1)

Ligands

in contact, ≤ 4 Å

Hexaethylene glycolP6G

+ 2 additives (Acetate, Tetraethylene glycol)

AcetateACT
DrugBank DB14511
Tetraethylene glycolPG4

Pfam Families

PF11424DUF3195

Protein of unknown function (DUF3195) N-terminal domain

External Links

ECOD PDB View: 1RKI RCSB PDB: 1RKI PDBe: 1RKI UniProt: Q8ZYK2

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.