ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2fqoA1 - ECOD Domain | ECOD

ECOD/Domains/e2fqoA1

e2fqoA1

UID: 000067139

PDB

Range: A:4-157
PDB: 2FQO chain A(all domains)
UniProt: O34667 (all domains)
Gene: luxS

Molecule: S-ribosylhomocysteine lyase

3D Structure

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Related Domains

Browse other domains in LuxS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyLuxS(309.1.1.3)

Ligands

in contact, ≤ 4 Å

COBALT (II) IONCO
metal
(2S)-2-AMINO-4-[(2R,3R)-2,3-DIHYDROXY-3-N-HYDROXYCARBAMOYL-PROPYLMERCAPTO]BUTYRIC ACIDHYI

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

S-Ribosylhomocysteinase (LuxS)

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 2FQO RCSB PDB: 2FQO PDBe: 2FQO UniProt: O34667

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.