ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vjeB1 - ECOD Domain | ECOD

ECOD/Domains/e1vjeB1

e1vjeB1

UID: 000067144

PDB

Range: B:7-156
PDB: 1VJE chain B(all domains)
UniProt: Q9RRU8 (all domains)
Gene: luxS

Molecule: Autoinducer-2 production protein LuxS

3D Structure

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Related Domains

Browse other domains in LuxS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyLuxS(309.1.1.3)

Ligands

in contact, ≤ 4 Å

SelenomethionineMSE
drugDrugBank DB11142
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

S-Ribosylhomocysteinase (LuxS)

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 1VJE RCSB PDB: 1VJE PDBe: 1VJE UniProt: Q9RRU8

Downloads

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